Multilevel analysis of Reaction time vs. Days of Sleep Deprevation
An analysis of subject reaction time vs. how many days they've been sleep deprived.
I fit a number of models to the Sleepstudy dataset (https://rdrr.io/cran/lme4/man/sleepstudy.html)
The first model is a common slope and intercept. This is analagous to linear regression with days predicting reaction time.
The second model fits a random intercept for each subject with a common slope.
The third model fits a random intercept and random slope for each subject.
The fourth model, which I judge as the best based on RMSE, fits a random intercept, slope, and independent within subject variance.
The model parameterization for the fourth model is:
Linear Regression
The "linear regression" assumes a general effect of sleep deprivation days on the population, but does a poor job of explaining subjects that don't follow the general pattern.
Random Slopes and Intercepts
The random slopes and intercepts model fits the data the best. It shows a general effect of sleep deprivation days on reaction time, but this is dependent on the subject.
The random slopes and intercepts model fits the data the best. It shows a general effect of sleep deprivation days on reaction time, but this is dependent on the subject.
RMSE for each of the models on the dataset is as follows:
m0: 47.533
m1: 29.500
m2: 23.434
m3: 23.240
The notebook for my analysis is here: https://github.com/btbyrnes/multilevel_models/blob/main/sleepstudy.ipynb